Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup98Q6PFD9 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm27441-201ENSMUST00000185000 105 ntBASIC12.77□□□□□ -0.37
Nup98Q6PFD9 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup98Q6PFD9 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm14997-201ENSMUST00000119232 636 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm6500-201ENSMUST00000119412 451 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm5311-201ENSMUST00000203518 709 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm5738-201ENSMUST00000206016 779 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm15264-201ENSMUST00000118050 502 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm7539-201ENSMUST00000189789 630 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup98Q6PFD9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.75□□□□□ -0.37
Nup98Q6PFD9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms