Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Gm19409-201ENSMUST00000198244 2858 ntBASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Rnf220Q6PDX6 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm12463-201ENSMUST00000118271 849 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm5070-201ENSMUST00000177599 862 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm37032-201ENSMUST00000194882 2975 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm5455-201ENSMUST00000058710 715 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Gm10478-201ENSMUST00000084451 396 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Rnf220Q6PDX6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm13392-201ENSMUST00000117708 150 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm11573-201ENSMUST00000119956 394 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm2991-201ENSMUST00000173338 480 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm27046-201ENSMUST00000182160 463 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm43962-201ENSMUST00000203898 190 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Gm9368-201ENSMUST00000219348 831 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Rnf220Q6PDX6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms