Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm44158-201ENSMUST00000203881 505 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm18561-201ENSMUST00000206027 804 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm45594-201ENSMUST00000211717 241 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm14892-201ENSMUST00000117636 267 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm13937-201ENSMUST00000121000 988 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm4917-201ENSMUST00000121452 650 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm27441-201ENSMUST00000185000 105 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm43163-201ENSMUST00000196571 442 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Gm19009-201ENSMUST00000223072 823 ntBASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcc2Q6PDG5 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm9133-201ENSMUST00000118289 540 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm8197-202ENSMUST00000193422 934 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm38321-201ENSMUST00000195053 235 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm7600-201ENSMUST00000209657 785 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcc2Q6PDG5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcc2Q6PDG5 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcc2Q6PDG5 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.83□□□□□ -0.35
Smarcc2Q6PDG5 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms