Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.16□□□□□ -0.46
Ift88Q61371 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ift88Q61371 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Gm23251-201ENSMUST00000103773 110 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Gm23200-201ENSMUST00000104379 132 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm7985-201ENSMUST00000183329 981 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.15□□□□□ -0.46
Ift88Q61371 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm10020-201ENSMUST00000081993 612 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ift88Q61371 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.15□□□□□ -0.46
Ift88Q61371 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.15□□□□□ -0.46
Ift88Q61371 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ift88Q61371 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ift88Q61371 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ift88Q61371 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ift88Q61371 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.14□□□□□ -0.47
Ift88Q61371 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ift88Q61371 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Gm7666-201ENSMUST00000146631 819 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Ift88Q61371 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Ift88Q61371 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm43916-201ENSMUST00000205062 967 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Gm1821-202ENSMUST00000227415 750 ntBASIC12.14□□□□□ -0.47
Ift88Q61371 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ift88Q61371 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.14□□□□□ -0.47
Ift88Q61371 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms