Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm20781-201ENSMUST00000193154 693 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm21736-201ENSMUST00000195399 693 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm31274-201ENSMUST00000197356 229 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm40414-201ENSMUST00000197608 481 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm43249-201ENSMUST00000200464 458 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm5178-201ENSMUST00000219380 898 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm26670-202ENSMUST00000226862 340 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm7589-201ENSMUST00000085631 534 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps54Q5SPW0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm3372-201ENSMUST00000198806 1792 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.17□□□□□ -0.3
Vps54Q5SPW0 Gm37031-201ENSMUST00000195487 2530 ntBASIC13.16□□□□□ -0.3
Vps54Q5SPW0 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps54Q5SPW0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps54Q5SPW0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps54Q5SPW0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms