Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm11578-201ENSMUST00000118530 459 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm13019-201ENSMUST00000120000 276 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm25951-201ENSMUST00000175330 64 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm44647-201ENSMUST00000207402 428 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rc3h1Q4VGL6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm9372-201ENSMUST00000168454 430 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm7593-201ENSMUST00000187246 644 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Platr10-202ENSMUST00000191479 818 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm6439-201ENSMUST00000199849 862 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gm7536-201ENSMUST00000077389 444 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rc3h1Q4VGL6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm14234-201ENSMUST00000119539 845 ntBASIC12.78□□□□□ -0.36
Rc3h1Q4VGL6 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms