Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx49Q4FZF3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx49Q4FZF3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx49Q4FZF3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx49Q4FZF3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx49Q4FZF3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm8152-201ENSMUST00000120842 637 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm16165-201ENSMUST00000160140 795 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm19927-201ENSMUST00000185792 781 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm18123-201ENSMUST00000210874 822 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm18001-201ENSMUST00000212023 688 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm7904-201ENSMUST00000217049 465 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ddx49Q4FZF3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm13171-201ENSMUST00000117233 391 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm24312-201ENSMUST00000178677 119 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm6644-201ENSMUST00000186507 951 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm2345-201ENSMUST00000193451 589 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ddx49Q4FZF3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms