Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm13422-201ENSMUST00000118834 504 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm13888-201ENSMUST00000119148 422 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm25492-201ENSMUST00000157383 129 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm2875-201ENSMUST00000211333 360 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Syne3Q4FZC9 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Syne3Q4FZC9 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm14395-201ENSMUST00000120494 563 ntBASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm12516-201ENSMUST00000120819 385 ntBASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm14460-201ENSMUST00000121511 639 ntBASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Syne3Q4FZC9 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms