Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm43163-201ENSMUST00000196571 442 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm9645-201ENSMUST00000197131 792 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.51□□□□□ -0.41
Gm28047Q3US59 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Gm28047Q3US59 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.5□□□□□ -0.41
Gm28047Q3US59 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm13408-201ENSMUST00000119822 798 ntBASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm13935-201ENSMUST00000121859 798 ntBASIC12.5□□□□□ -0.41
Gm28047Q3US59 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.5□□□□□ -0.41
Gm28047Q3US59 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.5□□□□□ -0.41
Gm28047Q3US59 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm28047Q3US59 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm28047Q3US59 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms