Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm4294-201ENSMUST00000105169 614 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm12218-201ENSMUST00000117666 399 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm12501-201ENSMUST00000119163 529 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm25881-201ENSMUST00000157783 103 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm19246-201ENSMUST00000173599 255 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm42997-202ENSMUST00000200321 985 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trim43aQ3TL54 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm8111-201ENSMUST00000117659 987 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm28032-201ENSMUST00000184104 96 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm6905-201ENSMUST00000205729 511 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Spcs1-203ENSMUST00000226374 592 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim43aQ3TL54 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms