Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm21039-201ENSMUST00000223359 2012 ntBASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ush2AQ2QI47 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Mir1900-201ENSMUST00000122714 78 ntBASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Gm27395-201ENSMUST00000183938 460 ntBASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 AC164315.1-202ENSMUST00000226723 657 ntBASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Gm24145-201ENSMUST00000082631 163 ntBASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Gm38312-201ENSMUST00000195426 1746 ntBASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ush2AQ2QI47 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Eda2r-202ENSMUST00000113832 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm1821-201ENSMUST00000111388 685 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Zfp982-202ENSMUST00000105721 1488 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 AC167013.2-201ENSMUST00000228520 2684 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm43773-201ENSMUST00000198548 2162 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Ugt1a9-201ENSMUST00000073772 2190 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm25593-201ENSMUST00000102272 96 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm29323-201ENSMUST00000189792 332 ntTSL 3 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm43903-201ENSMUST00000205126 617 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 AC157772.1-201ENSMUST00000226266 365 ntBASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Scgn-201ENSMUST00000021770 1412 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ush2AQ2QI47 Tctex1d1-206ENSMUST00000169211 1000 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms