Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm14274-201ENSMUST00000117182 615 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm5244-201ENSMUST00000164001 339 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23400-201ENSMUST00000174994 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm26463-201ENSMUST00000175065 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm24332-201ENSMUST00000175102 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25959-201ENSMUST00000175112 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm22475-201ENSMUST00000175169 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm22903-201ENSMUST00000175193 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25070-201ENSMUST00000175237 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm24159-201ENSMUST00000175264 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25299-201ENSMUST00000175283 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23798-201ENSMUST00000175560 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23802-201ENSMUST00000175565 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm26119-201ENSMUST00000175601 104 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25708-201ENSMUST00000177687 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm24370-201ENSMUST00000178007 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23049-201ENSMUST00000178068 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm28019-201ENSMUST00000178138 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25571-201ENSMUST00000178322 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25355-201ENSMUST00000178456 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm24975-201ENSMUST00000178492 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23189-201ENSMUST00000178954 102 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm25100-201ENSMUST00000179750 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm23064-201ENSMUST00000179866 101 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm27440-201ENSMUST00000184785 107 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm43564-201ENSMUST00000196185 211 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Trav11n-201ENSMUST00000200113 343 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm9791-201ENSMUST00000060997 447 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.92□□□□□ -0.5
Col9a2Q07643 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm5764-201ENSMUST00000118817 885 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms