Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm25561-201ENSMUST00000104607 125 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm14524-201ENSMUST00000121066 683 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 AC149294.3-201ENSMUST00000226888 732 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 n-R5s25-201ENSMUST00000082923 119 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC13.63□□□□□ -0.23
Cacna1sQ02789 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Mir6930-201ENSMUST00000183859 68 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 CT025689.5-201ENSMUST00000224316 986 ntBASIC13.63□□□□□ -0.23
Cacna1sQ02789 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1sQ02789 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm12481-201ENSMUST00000102482 297 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm6633-201ENSMUST00000173851 270 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 AC163038.2-201ENSMUST00000224851 650 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.62□□□□□ -0.23
Cacna1sQ02789 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1sQ02789 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Gm20281-201ENSMUST00000188225 267 ntBASIC13.61□□□□□ -0.23
Cacna1sQ02789 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Gm8848-201ENSMUST00000197270 1343 ntBASIC13.61□□□□□ -0.23
Cacna1sQ02789 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cacna1sQ02789 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms