Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm12247-201ENSMUST00000117585 670 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Cxcr4P70658 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm18367-201ENSMUST00000176139 600 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm23771-201ENSMUST00000178702 110 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm7741-201ENSMUST00000181445 989 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Mir8115-201ENSMUST00000184992 119 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm3551-201ENSMUST00000190750 664 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm44980-201ENSMUST00000205826 314 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.34□□□□□ -0.75
Cxcr4P70658 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.34□□□□□ -0.75
Cxcr4P70658 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.34□□□□□ -0.75
Cxcr4P70658 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcr4P70658 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Snord17-201ENSMUST00000104526 238 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm25148-201ENSMUST00000104611 123 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm11667-201ENSMUST00000119828 486 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm14665-201ENSMUST00000122294 557 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm27910-201ENSMUST00000185004 107 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm8574-201ENSMUST00000203207 924 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.33□□□□□ -0.76
Cxcr4P70658 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Cxcr4P70658 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cxcr4P70658 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms