Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC17.72■□□□□ 0.43
Cux2P70298 Gm18783-201ENSMUST00000220465 1151 ntBASIC17.72■□□□□ 0.43
Cux2P70298 AC134860.5-201ENSMUST00000225071 1249 ntBASIC17.72■□□□□ 0.43
Cux2P70298 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cux2P70298 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cux2P70298 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cux2P70298 AC167565.1-201ENSMUST00000226980 1833 ntBASIC17.72■□□□□ 0.43
Cux2P70298 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Gm38309-201ENSMUST00000192063 1518 ntBASIC17.71■□□□□ 0.43
Cux2P70298 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cux2P70298 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Cux2P70298 Gm29783-201ENSMUST00000219398 369 ntBASIC17.71■□□□□ 0.43
Cux2P70298 AC242269.1-201ENSMUST00000227020 741 ntBASIC17.71■□□□□ 0.43
Cux2P70298 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cux2P70298 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cux2P70298 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cux2P70298 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 AC134898.1-201ENSMUST00000223738 1836 ntBASIC17.7■□□□□ 0.42
Cux2P70298 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cux2P70298 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Gm15570-201ENSMUST00000122093 625 ntBASIC17.7■□□□□ 0.42
Cux2P70298 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Gm6463-201ENSMUST00000182090 966 ntBASIC17.7■□□□□ 0.42
Cux2P70298 Gm4430-202ENSMUST00000193902 1041 ntBASIC17.7■□□□□ 0.42
Cux2P70298 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC17.7■□□□□ 0.42
Cux2P70298 Zkscan7-205ENSMUST00000216462 990 ntBASIC17.7■□□□□ 0.42
Cux2P70298 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC17.7■□□□□ 0.42
Cux2P70298 AC124555.1-201ENSMUST00000227051 880 ntBASIC17.7■□□□□ 0.42
Cux2P70298 Gm8991-201ENSMUST00000073014 1075 ntBASIC17.7■□□□□ 0.42
Cux2P70298 n-R5s5-201ENSMUST00000083134 119 ntBASIC17.7■□□□□ 0.42
Cux2P70298 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cux2P70298 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.7■□□□□ 0.42
Cux2P70298 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cux2P70298 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Gm38348-201ENSMUST00000191718 2273 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Gm14853-201ENSMUST00000116081 549 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Gm11652-201ENSMUST00000117842 1267 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC17.69■□□□□ 0.42
Cux2P70298 Gm43833-201ENSMUST00000198828 293 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC17.69■□□□□ 0.42
Cux2P70298 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Cux2P70298 Gm18466-201ENSMUST00000209147 499 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cux2P70298 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 Dcstamp-205ENSMUST00000228556 1684 ntBASIC17.69■□□□□ 0.42
Cux2P70298 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cux2P70298 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cux2P70298 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.69■□□□□ 0.42
Cux2P70298 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 Gm7823-201ENSMUST00000120761 1623 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cux2P70298 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Gm5400-201ENSMUST00000118494 943 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Gm13377-201ENSMUST00000137984 683 ntBASIC17.68■□□□□ 0.42
Cux2P70298 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC17.68■□□□□ 0.42
Cux2P70298 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cux2P70298 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC17.68■□□□□ 0.42
Cux2P70298 Gm27149-201ENSMUST00000184716 1266 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms