Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm12997-201ENSMUST00000120207 640 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm11836-201ENSMUST00000121022 441 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Mir1896-201ENSMUST00000122641 81 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm28032-201ENSMUST00000184104 96 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Mir7051-201ENSMUST00000184167 73 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm27441-201ENSMUST00000185000 105 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gm9257-201ENSMUST00000221254 232 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.19□□□□□ -0.46
Hmgb1P63158 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgb1P63158 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hmgb1P63158 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm14592-201ENSMUST00000117201 560 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm14395-201ENSMUST00000120494 563 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.18□□□□□ -0.46
Hmgb1P63158 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm5451-201ENSMUST00000080545 579 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm10020-201ENSMUST00000081993 612 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.18□□□□□ -0.46
Hmgb1P63158 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgb1P63158 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgb1P63158 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgb1P63158 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms