Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm9368-201ENSMUST00000219348 831 ntBASIC7.79□□□□□ -1.16
Rpl39P62892 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Rpl39P62892 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm44445-201ENSMUST00000204075 2683 ntBASIC7.79□□□□□ -1.16
Rpl39P62892 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC7.79□□□□□ -1.16
Rpl39P62892 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Rpl39P62892 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Rpl39P62892 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm13910-201ENSMUST00000121752 1428 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Rpl39P62892 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm12857-201ENSMUST00000117678 592 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC7.78□□□□□ -1.16
Rpl39P62892 Trav4d-2-201ENSMUST00000120914 335 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm27501-201ENSMUST00000183599 107 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Gm27530-201ENSMUST00000184096 98 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Gm3332-201ENSMUST00000189337 928 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Saa-ps-201ENSMUST00000211148 320 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Gm19208-201ENSMUST00000213861 912 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Gm6867-201ENSMUST00000219165 425 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 AC122371.3-201ENSMUST00000223402 1061 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 AC112945.1-201ENSMUST00000226413 514 ntBASIC7.78□□□□□ -1.16
Rpl39P62892 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Rpl39P62892 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Rpl39P62892 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Rpl39P62892 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rpl39P62892 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rpl39P62892 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Rpl39P62892 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.16
Rpl39P62892 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
Rpl39P62892 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Rpl39P62892 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rpl39P62892 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms