Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm4310-201ENSMUST00000177847 889 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 Gm5745-201ENSMUST00000183748 313 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.93□□□□□ -0.82
Lsm3P62311 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.93□□□□□ -0.82
Lsm3P62311 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lsm3P62311 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.93□□□□□ -0.82
Lsm3P62311 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm3P62311 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.92□□□□□ -0.82
Lsm3P62311 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm26286-201ENSMUST00000104166 134 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm15920-201ENSMUST00000118998 402 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm24074-201ENSMUST00000158178 260 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.92□□□□□ -0.82
Lsm3P62311 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Gm42859-201ENSMUST00000199572 193 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Gm5302-201ENSMUST00000202130 796 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lsm3P62311 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lsm3P62311 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.92□□□□□ -0.82
Lsm3P62311 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm3P62311 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm3P62311 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm3P62311 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm3P62311 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Lsm3P62311 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm3P62311 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Mir1247-201ENSMUST00000116706 82 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.91□□□□□ -0.82
Lsm3P62311 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm3P62311 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Olfml3-204ENSMUST00000169286 874 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm3P62311 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.91□□□□□ -0.82
Lsm3P62311 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Gm8712-201ENSMUST00000221090 701 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.91□□□□□ -0.82
Lsm3P62311 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm3P62311 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm3P62311 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm3P62311 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm3P62311 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms