Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm5395-201ENSMUST00000121650 915 ntBASIC14.79□□□□□ -0.04
Nphp4P59240 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nphp4P59240 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm38321-201ENSMUST00000195053 235 ntBASIC14.79□□□□□ -0.04
Nphp4P59240 Gm8643-201ENSMUST00000195228 625 ntBASIC14.79□□□□□ -0.04
Nphp4P59240 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.79□□□□□ -0.04
Nphp4P59240 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Gm13120-201ENSMUST00000117343 1446 ntBASIC14.79□□□□□ -0.04
Nphp4P59240 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp4P59240 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.78□□□□□ -0.04
Nphp4P59240 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC14.78□□□□□ -0.04
Nphp4P59240 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm7069-201ENSMUST00000182418 1008 ntBASIC14.78□□□□□ -0.04
Nphp4P59240 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC14.78□□□□□ -0.04
Nphp4P59240 Gm4430-202ENSMUST00000193902 1041 ntBASIC14.78□□□□□ -0.04
Nphp4P59240 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.78□□□□□ -0.04
Nphp4P59240 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nphp4P59240 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nphp4P59240 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp4P59240 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nphp4P59240 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Gm13688-201ENSMUST00000121557 608 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nphp4P59240 Gm11942-201ENSMUST00000180255 345 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Nphp4P59240 Gm43610-201ENSMUST00000199117 365 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Rps3a3-201ENSMUST00000074680 795 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nphp4P59240 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nphp4P59240 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.77□□□□□ -0.04
Nphp4P59240 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nphp4P59240 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nphp4P59240 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nphp4P59240 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nphp4P59240 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nphp4P59240 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms