Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.42□□□□□ -0.74
Nup43P59235 Gm13937-201ENSMUST00000121000 988 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Gm15744-201ENSMUST00000161734 213 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Gm16107-201ENSMUST00000162523 862 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Gm42518-201ENSMUST00000196277 938 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Nup43P59235 Gm45359-201ENSMUST00000210635 427 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.42□□□□□ -0.74
Nup43P59235 Gm29787-201ENSMUST00000222129 849 ntBASIC10.42□□□□□ -0.74
Nup43P59235 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nup43P59235 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nup43P59235 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nup43P59235 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nup43P59235 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.41□□□□□ -0.74
Nup43P59235 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.41□□□□□ -0.74
Nup43P59235 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nup43P59235 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nup43P59235 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Gm10169-201ENSMUST00000121822 348 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Gm16165-201ENSMUST00000160140 795 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.41□□□□□ -0.74
Nup43P59235 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.41□□□□□ -0.74
Nup43P59235 Gm28032-201ENSMUST00000184104 96 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Mir6407-201ENSMUST00000184510 101 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.41□□□□□ -0.74
Nup43P59235 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Gm44545-201ENSMUST00000208262 746 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC10.41□□□□□ -0.74
Nup43P59235 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.41□□□□□ -0.74
Nup43P59235 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nup43P59235 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nup43P59235 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nup43P59235 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.41□□□□□ -0.74
Nup43P59235 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms