Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm6378-201ENSMUST00000084199 444 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.32□□□□□ -0.6
Sox1P53783 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox1P53783 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox1P53783 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox1P53783 Gm7790-201ENSMUST00000118716 1310 ntBASIC11.32□□□□□ -0.6
Sox1P53783 AU015228-201ENSMUST00000121103 1320 ntBASIC11.32□□□□□ -0.6
Sox1P53783 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox1P53783 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox1P53783 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sox1P53783 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm15132-201ENSMUST00000118581 652 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm11960-201ENSMUST00000122068 925 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.31□□□□□ -0.6
Sox1P53783 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox1P53783 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox1P53783 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm8502-201ENSMUST00000185708 901 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm21147-201ENSMUST00000186046 913 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm8510-201ENSMUST00000189202 895 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm2316-201ENSMUST00000190613 921 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox1P53783 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.31□□□□□ -0.6
Sox1P53783 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox1P53783 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox1P53783 Gm10020-201ENSMUST00000081993 612 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sox1P53783 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.31□□□□□ -0.6
Sox1P53783 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox1P53783 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox1P53783 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox1P53783 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms