Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Rfx3P48381 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.97□□□□□ -0.81
Rfx3P48381 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rfx3P48381 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.97□□□□□ -0.81
Rfx3P48381 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rfx3P48381 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rfx3P48381 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rfx3P48381 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rfx3P48381 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Rfx3P48381 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.81
Rfx3P48381 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.96□□□□□ -0.81
Rfx3P48381 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rfx3P48381 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.81
Rfx3P48381 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Rfx3P48381 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm9089-201ENSMUST00000122027 526 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm7666-201ENSMUST00000146631 819 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.96□□□□□ -0.82
Rfx3P48381 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm37835-201ENSMUST00000193305 361 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Gm42997-202ENSMUST00000200321 985 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Gm8574-201ENSMUST00000203207 924 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Gm2517-201ENSMUST00000215651 348 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Rfx3P48381 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.96□□□□□ -0.82
Rfx3P48381 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Rfx3P48381 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.96□□□□□ -0.82
Rfx3P48381 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Rfx3P48381 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Rfx3P48381 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Rfx3P48381 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.96□□□□□ -0.82
Rfx3P48381 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rfx3P48381 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Rfx3P48381 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Rfx3P48381 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm11244-201ENSMUST00000121243 237 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Mir1896-201ENSMUST00000122641 81 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.95□□□□□ -0.82
Rfx3P48381 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm25732-201ENSMUST00000175168 60 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Ginm1-202ENSMUST00000065124 300 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.95□□□□□ -0.82
Rfx3P48381 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.95□□□□□ -0.82
Rfx3P48381 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rfx3P48381 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rfx3P48381 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms