Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.35□□□□□ -0.59
Cxcl12P40224 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm14633-201ENSMUST00000121152 470 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm22662-201ENSMUST00000175290 256 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm9409-201ENSMUST00000197017 316 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm6859-201ENSMUST00000218614 989 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm5292-201ENSMUST00000073317 580 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm16477-201ENSMUST00000085365 801 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm17415-201ENSMUST00000096427 789 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Gm8618-201ENSMUST00000097570 432 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cxcl12P40224 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Rubie-203ENSMUST00000227803 2430 ntBASIC11.34□□□□□ -0.59
Cxcl12P40224 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cxcl12P40224 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cxcl12P40224 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm15373-201ENSMUST00000121495 214 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Mir6396-201ENSMUST00000183603 111 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm8525-201ENSMUST00000189674 861 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm38145-201ENSMUST00000192319 693 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC11.33□□□□□ -0.6
Cxcl12P40224 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Atf7-201ENSMUST00000096143 390 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.33□□□□□ -0.6
Cxcl12P40224 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cxcl12P40224 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cxcl12P40224 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm6276-201ENSMUST00000120159 579 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms