Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chd1P40201 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1P40201 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1P40201 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1P40201 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1P40201 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
Chd1P40201 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1P40201 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1P40201 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1P40201 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1P40201 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chd1P40201 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chd1P40201 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Gm42731-201ENSMUST00000201839 1641 ntBASIC16.13■□□□□ 0.17
Chd1P40201 AC149588.2-201ENSMUST00000228182 1859 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 AC125487.1-201ENSMUST00000217888 1300 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Chd1P40201 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Katna1-202ENSMUST00000165806 1775 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Katna1-201ENSMUST00000019929 1774 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Chd1P40201 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Gm13413-201ENSMUST00000120953 602 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Gm13551-201ENSMUST00000121286 430 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Mir6360-201ENSMUST00000184278 126 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd1P40201 Gm37232-201ENSMUST00000194887 367 ntBASIC16.13■□□□□ 0.17
Chd1P40201 AC160109.1-201ENSMUST00000225592 729 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Gm42449-201ENSMUST00000200349 2258 ntBASIC16.13■□□□□ 0.17
Chd1P40201 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1P40201 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chd1P40201 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chd1P40201 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd1P40201 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Gm8625-201ENSMUST00000194185 1077 ntBASIC16.12■□□□□ 0.17
Chd1P40201 Gm18538-201ENSMUST00000204265 484 ntBASIC16.12■□□□□ 0.17
Chd1P40201 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC16.12■□□□□ 0.17
Chd1P40201 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC16.12■□□□□ 0.17
Chd1P40201 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd1P40201 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd1P40201 Cyp2c44-201ENSMUST00000026211 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1P40201 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd1P40201 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chd1P40201 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd1P40201 Gm11951-201ENSMUST00000116005 431 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Gm42591-201ENSMUST00000197249 700 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Gm42915-201ENSMUST00000197478 323 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Gm42588-201ENSMUST00000200538 1297 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd1P40201 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chd1P40201 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd1P40201 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd1P40201 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd1P40201 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC16.11■□□□□ 0.17
Chd1P40201 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC16.11■□□□□ 0.17
Chd1P40201 Gm26931-201ENSMUST00000182273 609 ntBASIC16.11■□□□□ 0.17
Chd1P40201 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Gm37559-201ENSMUST00000193556 832 ntBASIC16.11■□□□□ 0.17
Chd1P40201 Gm26930-201ENSMUST00000194874 1244 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms