Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm20574-201ENSMUST00000182867 917 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm5851-201ENSMUST00000194132 1204 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 Gm7680-201ENSMUST00000216198 1348 ntBASIC11.33□□□□□ -0.6
Hoxb3P09026 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxb3P09026 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm5392-201ENSMUST00000122189 789 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm23884-201ENSMUST00000122687 294 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm13827-201ENSMUST00000148801 372 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Mir6359-201ENSMUST00000183668 81 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxb3P09026 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm28833-201ENSMUST00000189671 559 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm33571-201ENSMUST00000193271 657 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm8869-201ENSMUST00000195222 947 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm5194-201ENSMUST00000221457 742 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 AC162934.3-201ENSMUST00000223015 841 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 AC131100.2-201ENSMUST00000227701 998 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hoxb3P09026 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxb3P09026 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC11.32□□□□□ -0.6
Hoxb3P09026 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxb3P09026 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb3P09026 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxb3P09026 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hoxb3P09026 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hoxb3P09026 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxb3P09026 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms