Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm17391-201ENSMUST00000171036 126 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm23771-201ENSMUST00000178702 110 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm27910-201ENSMUST00000185004 107 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm29288-201ENSMUST00000191582 901 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm18753-201ENSMUST00000201000 566 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Mt1-202ENSMUST00000211807 1085 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm8959-201ENSMUST00000213150 571 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.24□□□□□ -0.61
PdgfrbP05622 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm9133-201ENSMUST00000118289 540 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Mir1943-201ENSMUST00000158276 73 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PdgfrbP05622 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm42997-202ENSMUST00000200321 985 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.23□□□□□ -0.61
PdgfrbP05622 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
PdgfrbP05622 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdgfrbP05622 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdgfrbP05622 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdgfrbP05622 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms