Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm25766-201ENSMUST00000104101 131 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm11952-201ENSMUST00000121172 821 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 n-R5s84-201ENSMUST00000122591 109 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm19927-201ENSMUST00000185792 781 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm37852-201ENSMUST00000193027 350 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm43138-201ENSMUST00000199123 708 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm18561-201ENSMUST00000206027 804 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm9463-201ENSMUST00000206707 601 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Igh-VJ558P01758 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm39288-201ENSMUST00000210554 446 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms