Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
AlyrefO08583 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Gm14113-201ENSMUST00000121399 976 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.37□□□□□ -0.59
AlyrefO08583 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm7741-201ENSMUST00000181445 989 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Gm27440-201ENSMUST00000184785 107 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm3379-201ENSMUST00000222259 642 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Gm26782-203ENSMUST00000227103 751 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
AlyrefO08583 Gm23458-201ENSMUST00000083257 169 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
AlyrefO08583 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
AlyrefO08583 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.37□□□□□ -0.59
AlyrefO08583 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.37□□□□□ -0.59
AlyrefO08583 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AlyrefO08583 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
AlyrefO08583 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.36□□□□□ -0.59
AlyrefO08583 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm20493-201ENSMUST00000173706 213 ntBASIC11.36□□□□□ -0.59
AlyrefO08583 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.36□□□□□ -0.59
AlyrefO08583 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm43966-201ENSMUST00000203301 612 ntBASIC11.36□□□□□ -0.59
AlyrefO08583 Gm7525-201ENSMUST00000219425 454 ntBASIC11.36□□□□□ -0.59
AlyrefO08583 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.36□□□□□ -0.59
AlyrefO08583 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.36□□□□□ -0.59
AlyrefO08583 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
AlyrefO08583 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
AlyrefO08583 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
AlyrefO08583 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
AlyrefO08583 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms