Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm37688-201ENSMUST00000195195 465 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm44498-201ENSMUST00000199509 111 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 AC154461.1-201ENSMUST00000224207 1005 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.34□□□□□ -0.27
NpcdF8VQB8 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.34□□□□□ -0.27
NpcdF8VQB8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.34□□□□□ -0.27
NpcdF8VQB8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Gm14699-201ENSMUST00000122340 228 ntBASIC13.34□□□□□ -0.27
NpcdF8VQB8 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Mir1941-201ENSMUST00000157834 83 ntBASIC13.34□□□□□ -0.27
NpcdF8VQB8 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NpcdF8VQB8 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NpcdF8VQB8 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NpcdF8VQB8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NpcdF8VQB8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.33□□□□□ -0.27
NpcdF8VQB8 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC13.33□□□□□ -0.27
NpcdF8VQB8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 Gm18555-201ENSMUST00000197935 584 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.33□□□□□ -0.28
NpcdF8VQB8 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms