Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm11929-201ENSMUST00000118175 945 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm26356-201ENSMUST00000158217 283 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm2316-201ENSMUST00000190613 921 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm23458-201ENSMUST00000083257 169 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Gm15599-201ENSMUST00000122283 1345 ntBASIC11.13□□□□□ -0.63
Col4a6B1AVK5 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col4a6B1AVK5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm15132-201ENSMUST00000118581 652 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm8864-201ENSMUST00000118653 1010 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm6500-201ENSMUST00000119412 451 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col4a6B1AVK5 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm24066-201ENSMUST00000104515 131 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Mir1190-201ENSMUST00000116925 96 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm7781-201ENSMUST00000117258 788 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm28916-201ENSMUST00000186988 699 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Gm9864-201ENSMUST00000090043 1656 ntBASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col4a6B1AVK5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms