Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm23769-201ENSMUST00000104441 121 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm12418-201ENSMUST00000118116 942 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm13827-201ENSMUST00000148801 372 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm23675-201ENSMUST00000157311 125 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm6612-201ENSMUST00000170777 395 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm24312-201ENSMUST00000178677 119 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm44640-201ENSMUST00000206894 247 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Erich3-203ENSMUST00000189969 3460 ntBASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rrp8Q9DB85 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm8019-201ENSMUST00000119317 587 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm12337-201ENSMUST00000119634 400 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm16547-201ENSMUST00000159474 293 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm43002-201ENSMUST00000200310 155 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Rrp8Q9DB85 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms