Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gtf3c6Q9D8P7 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Gm37759-201ENSMUST00000194155 3246 ntBASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.02□□□□□ -0.48
Gtf3c6Q9D8P7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm12165-201ENSMUST00000117047 342 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm15615-201ENSMUST00000118876 198 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm8302-201ENSMUST00000119217 852 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm11836-201ENSMUST00000121022 441 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm22144-201ENSMUST00000157402 102 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm24074-201ENSMUST00000158178 260 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm19246-201ENSMUST00000173599 255 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm37284-201ENSMUST00000193607 539 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gtf3c6Q9D8P7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gm25492-201ENSMUST00000157383 129 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gm23699-201ENSMUST00000158835 135 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gm19353-201ENSMUST00000184561 445 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gm5302-201ENSMUST00000202130 796 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Gm5451-201ENSMUST00000080545 579 ntBASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gtf3c6Q9D8P7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms