Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm7997-201ENSMUST00000210546 980 ntBASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh23Q99PF4 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm22876-201ENSMUST00000175450 298 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm44936-201ENSMUST00000207324 735 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm9458-201ENSMUST00000135273 727 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm30619-201ENSMUST00000213962 686 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 AC159899.1-201ENSMUST00000214024 733 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh23Q99PF4 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm24981-201ENSMUST00000104459 132 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm5801-201ENSMUST00000182247 780 ntBASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh23Q99PF4 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms