Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15171-201ENSMUST00000122191 334 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm6291-201ENSMUST00000179994 309 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Mir8111-201ENSMUST00000184463 137 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm33707-201ENSMUST00000195135 569 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.71□□□□□ -0.53
Clp1Q99LI9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clp1Q99LI9 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.71□□□□□ -0.54
Clp1Q99LI9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Clp1Q99LI9 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Mir744-201ENSMUST00000103261 100 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm24140-201ENSMUST00000122773 326 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm28671-201ENSMUST00000187036 692 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm30055-201ENSMUST00000203175 803 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.7□□□□□ -0.54
Clp1Q99LI9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clp1Q99LI9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.69□□□□□ -0.54
Clp1Q99LI9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.69□□□□□ -0.54
Clp1Q99LI9 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Clp1Q99LI9 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms