Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.06□□□□□ -0.16
Usp16Q99LG0 Gm43912-201ENSMUST00000204352 538 ntBASIC14.06□□□□□ -0.16
Usp16Q99LG0 Gm33080-201ENSMUST00000205429 172 ntBASIC14.06□□□□□ -0.16
Usp16Q99LG0 Gm5178-201ENSMUST00000219380 898 ntBASIC14.06□□□□□ -0.16
Usp16Q99LG0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Gm26670-202ENSMUST00000226862 340 ntBASIC14.06□□□□□ -0.16
Usp16Q99LG0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp16Q99LG0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm6158-201ENSMUST00000109467 904 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Mir1893-201ENSMUST00000122565 83 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm18042-201ENSMUST00000219887 790 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm25517-201ENSMUST00000083865 134 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.05□□□□□ -0.16
Usp16Q99LG0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp16Q99LG0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Gm6423-201ENSMUST00000204315 934 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp16Q99LG0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.04□□□□□ -0.16
Usp16Q99LG0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms