Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Mir704-201ENSMUST00000102106 77 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm6633-201ENSMUST00000173851 270 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm6129-201ENSMUST00000220725 801 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.79□□□□□ -0.36
StrcQ8VIM6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
StrcQ8VIM6 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm14276-201ENSMUST00000117941 720 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm13071-201ENSMUST00000122237 376 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm23899-201ENSMUST00000158112 90 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Spin3-ps-201ENSMUST00000192825 770 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm34780-201ENSMUST00000193896 949 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm38135-201ENSMUST00000195068 502 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 AC140426.1-201ENSMUST00000227933 459 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 AU015228-201ENSMUST00000121103 1320 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 AC134898.1-201ENSMUST00000223738 1836 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm15554-201ENSMUST00000120406 913 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm25426-201ENSMUST00000157606 170 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Mir3060-201ENSMUST00000175339 83 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm18119-201ENSMUST00000219972 616 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm4883-201ENSMUST00000085702 528 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm10250-201ENSMUST00000090488 482 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.78□□□□□ -0.36
StrcQ8VIM6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
StrcQ8VIM6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
StrcQ8VIM6 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
StrcQ8VIM6 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.77□□□□□ -0.36
StrcQ8VIM6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
StrcQ8VIM6 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
StrcQ8VIM6 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
StrcQ8VIM6 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
StrcQ8VIM6 Gm25561-201ENSMUST00000104607 125 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms