Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm15329-201ENSMUST00000121408 155 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Mir1956-201ENSMUST00000157748 65 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm6407-201ENSMUST00000176468 549 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm21778-201ENSMUST00000178779 471 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm28388-201ENSMUST00000186262 437 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm28324-201ENSMUST00000187913 264 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm38210-201ENSMUST00000191944 809 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm37905-201ENSMUST00000195310 341 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm42657-201ENSMUST00000201746 211 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm45594-201ENSMUST00000211717 241 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc12Q8K5B8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc12Q8K5B8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm10169-201ENSMUST00000121822 348 ntBASIC9.39□□□□□ -0.91
Hoxc12Q8K5B8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms