Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.41□□□□□ -0.74
Clrn1Q8K445 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Clrn1Q8K445 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm14263-201ENSMUST00000117955 746 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm12986-201ENSMUST00000119037 967 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm30946-201ENSMUST00000198288 724 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm18561-201ENSMUST00000206027 804 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm45550-201ENSMUST00000209380 946 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Gm9111-201ENSMUST00000219394 709 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.4□□□□□ -0.74
Clrn1Q8K445 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Clrn1Q8K445 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Clrn1Q8K445 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm25766-201ENSMUST00000104101 131 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm6754-201ENSMUST00000117124 913 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm14592-201ENSMUST00000117201 560 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm24074-201ENSMUST00000158178 260 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Snord55-201ENSMUST00000174939 79 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms