Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm7255-201ENSMUST00000187371 908 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Spcs1-203ENSMUST00000226374 592 ntBASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cchcr1Q8K2I2 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm4726-201ENSMUST00000135604 736 ntBASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm6019-201ENSMUST00000148369 736 ntBASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cchcr1Q8K2I2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cchcr1Q8K2I2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cchcr1Q8K2I2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cchcr1Q8K2I2 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cchcr1Q8K2I2 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cchcr1Q8K2I2 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cchcr1Q8K2I2 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms