Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Usp44Q8C2S0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm37597-201ENSMUST00000191853 382 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm37852-201ENSMUST00000193027 350 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usp44Q8C2S0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm25063-201ENSMUST00000104666 94 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm9358-201ENSMUST00000183067 927 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm18776-201ENSMUST00000188833 654 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm8255-201ENSMUST00000218693 305 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usp44Q8C2S0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Usp44Q8C2S0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms