Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm25766-201ENSMUST00000104101 131 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm3828-201ENSMUST00000121817 257 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm25554-201ENSMUST00000158075 113 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm18827-201ENSMUST00000188341 790 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.36□□□□□ -0.59
Trub1Q8C0D0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm42997-202ENSMUST00000200321 985 ntBASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm18042-201ENSMUST00000219887 790 ntBASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.35□□□□□ -0.59
Trub1Q8C0D0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
Trub1Q8C0D0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms