Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm6382-201ENSMUST00000118873 942 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm15785-201ENSMUST00000119145 694 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm15644-201ENSMUST00000121764 387 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm23617-201ENSMUST00000175410 95 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm26927-201ENSMUST00000182385 965 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm26993-201ENSMUST00000182766 789 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm29474-201ENSMUST00000187688 379 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm28396-201ENSMUST00000190309 379 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm43630-201ENSMUST00000201550 776 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm44274-201ENSMUST00000203417 256 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim35Q8C006 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.8□□□□□ -0.36
Trim35Q8C006 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim35Q8C006 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim35Q8C006 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim35Q8C006 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm15422-201ENSMUST00000117453 541 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm12957-201ENSMUST00000117835 377 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm16053-201ENSMUST00000120511 188 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm8877-201ENSMUST00000172657 655 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm27514-201ENSMUST00000183692 110 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm27682-201ENSMUST00000183930 110 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm28060-201ENSMUST00000191554 189 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm42594-201ENSMUST00000199511 246 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm3793-201ENSMUST00000204973 672 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm45841-201ENSMUST00000207700 164 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.79□□□□□ -0.36
Trim35Q8C006 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim35Q8C006 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim35Q8C006 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim35Q8C006 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms