Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm23218-201ENSMUST00000158124 276 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm16107-201ENSMUST00000162523 862 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm38216-201ENSMUST00000194872 1214 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm44814-201ENSMUST00000207018 434 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm8255-201ENSMUST00000218693 305 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm9102-201ENSMUST00000219250 465 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm4604-201ENSMUST00000025040 390 ntBASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh19Q80TF3 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm12389-201ENSMUST00000117696 418 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm13022-201ENSMUST00000121181 285 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm24248-201ENSMUST00000157321 322 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm25343-201ENSMUST00000157460 107 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm17192-201ENSMUST00000169031 511 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm44216-201ENSMUST00000203942 157 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdh19Q80TF3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pcdh19Q80TF3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms