Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx55Q6ZPL9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm6238-201ENSMUST00000120999 465 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm11736-201ENSMUST00000121468 505 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm17944-201ENSMUST00000186351 643 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm29304-201ENSMUST00000186555 695 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm29223-201ENSMUST00000188867 695 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm37921-201ENSMUST00000194333 695 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm17936-201ENSMUST00000199413 988 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ddx55Q6ZPL9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm15636-201ENSMUST00000119205 668 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm43866-201ENSMUST00000203894 839 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm5738-201ENSMUST00000206016 779 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm22341-201ENSMUST00000083775 129 ntBASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ddx55Q6ZPL9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ddx55Q6ZPL9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms