Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm28032-201ENSMUST00000184104 96 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm11573-201ENSMUST00000119956 394 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Mir1896-201ENSMUST00000122641 81 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm8531-201ENSMUST00000188319 893 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm42518-201ENSMUST00000196277 938 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm44323-201ENSMUST00000198689 129 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm10263-201ENSMUST00000085163 300 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.87□□□□□ -0.35
Smarcc2Q6PDG5 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcc2Q6PDG5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms