Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm15280-201ENSMUST00000126961 640 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm27430-201ENSMUST00000184585 107 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm27321-201ENSMUST00000185021 205 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm37042-201ENSMUST00000193816 581 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm44333-201ENSMUST00000197168 107 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm45714-201ENSMUST00000211466 2722 ntBASIC9.02□□□□□ -0.97
Trim63Q38HM4 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trim63Q38HM4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Spag8-201ENSMUST00000084646 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Hyal1-201ENSMUST00000010195 3014 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Mir449b-201ENSMUST00000104833 80 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Gm44420-201ENSMUST00000203669 490 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Olfr721-ps1-202ENSMUST00000206688 1097 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 AI463170-201ENSMUST00000217839 970 ntBASIC9.01□□□□□ -0.97
Trim63Q38HM4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim63Q38HM4 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 AC121286.2-201ENSMUST00000218069 2470 ntBASIC9□□□□□ -0.97
Trim63Q38HM4 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trim63Q38HM4 Stk36-202ENSMUST00000087186 4065 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim63Q38HM4 Gm28653-201ENSMUST00000185494 5276 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms