Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ebf1Q07802 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ebf1Q07802 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ebf1Q07802 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf1Q07802 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm26272-201ENSMUST00000179241 132 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm8894-201ENSMUST00000074642 666 ntBASIC11.24□□□□□ -0.61
Ebf1Q07802 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.24□□□□□ -0.61
Ebf1Q07802 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ebf1Q07802 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm25562-201ENSMUST00000104608 133 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm25226-201ENSMUST00000158198 123 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm9372-201ENSMUST00000168454 430 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.23□□□□□ -0.61
Ebf1Q07802 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Trav11n-201ENSMUST00000200113 343 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Capsl-202ENSMUST00000226688 739 ntBASIC11.23□□□□□ -0.61
Ebf1Q07802 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf1Q07802 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf1Q07802 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms