Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm11919-201ENSMUST00000117609 721 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Mir1893-201ENSMUST00000122565 83 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm6855-201ENSMUST00000206307 790 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.94□□□□□ -0.5
Col9a2Q07643 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col9a2Q07643 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a2Q07643 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm14993-201ENSMUST00000121180 164 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm11993-201ENSMUST00000121861 820 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm25569-201ENSMUST00000157175 131 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm45481-201ENSMUST00000209717 877 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.93□□□□□ -0.5
Col9a2Q07643 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col9a2Q07643 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col9a2Q07643 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col9a2Q07643 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms