Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm15329-201ENSMUST00000121408 155 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.44□□□□□ -0.74
Apoa1Q00623 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm38321-201ENSMUST00000195053 235 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm7783-201ENSMUST00000204795 781 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm32111-201ENSMUST00000207689 846 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.44□□□□□ -0.74
Apoa1Q00623 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.44□□□□□ -0.74
Apoa1Q00623 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Apoa1Q00623 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.44□□□□□ -0.74
Apoa1Q00623 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm4294-201ENSMUST00000105169 614 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm13461-201ENSMUST00000120980 662 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm8199-201ENSMUST00000121323 823 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm12407-201ENSMUST00000180219 324 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm7504-201ENSMUST00000201449 424 ntBASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.43□□□□□ -0.74
Apoa1Q00623 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Apoa1Q00623 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Apoa1Q00623 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.42□□□□□ -0.74
Apoa1Q00623 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.42□□□□□ -0.74
Apoa1Q00623 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.42□□□□□ -0.74
Apoa1Q00623 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Gm8731-201ENSMUST00000118088 412 ntBASIC10.42□□□□□ -0.74
Apoa1Q00623 Gm12501-201ENSMUST00000119163 529 ntBASIC10.42□□□□□ -0.74
Apoa1Q00623 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Apoa1Q00623 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.42□□□□□ -0.74
Apoa1Q00623 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms