Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-3P97334 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.84□□□□□ -0.19
Nkx2-3P97334 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.84□□□□□ -0.19
Nkx2-3P97334 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Gm22876-201ENSMUST00000175450 298 ntBASIC13.84□□□□□ -0.19
Nkx2-3P97334 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.84□□□□□ -0.19
Nkx2-3P97334 AC102523.2-201ENSMUST00000227813 983 ntBASIC13.84□□□□□ -0.19
Nkx2-3P97334 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-3P97334 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-3P97334 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm13857-201ENSMUST00000139645 173 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm26208-201ENSMUST00000158677 124 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm6518-201ENSMUST00000208450 342 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm26226-201ENSMUST00000082509 116 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Gm12716-201ENSMUST00000120606 1354 ntBASIC13.83□□□□□ -0.2
Nkx2-3P97334 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-3P97334 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.82□□□□□ -0.2
Nkx2-3P97334 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-3P97334 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms